- Nolasco, S. & Valdez-Mondragón, A*. 2022. To be or not to be… Integrative taxonomy and species delimitation in the daddy long-legs of the genus Physocyclus (Araneae: Pholcidae) using DNA barcoding and morphology. ZooKeys. 1135: 93-118.
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- Huber, B. A., Meng, G., Acurio, A. E., Astrin, J. J., Inclán, D. J., Izquierdo, M. & A. Valdez-Mondragón. 2022. Metagonia spiders of Galápagos: blind cave-dwellers and their epigean relatives (Araneae, Pholcidae). Invertebrate Systematics. 36(7): 647-678.
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- Nolasco, S. & Valdez-Mondragón, A.* 2022. Four new species of the spider genus Physocyclus Simon, 1893 (Araneae: Pholcidae) from Mexico, with updated taxonomic identification keys. European Journal of Taxonomy. 13: 173-206.
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- Valdez-Mondragón, A.*, Cortez-Roldán, M. R. 2021. COI mtDNA barcoding and morphology for the description of a newspecies of ricinuleid of the genus Pseudocellus (Arachnida: Ricinulei: Ricinoididae) from El Triunfo Biosphere Reserve, Chiapas, Mexico. European Journal of Taxonomy. 778: 1-25.
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- Cabrera-Espinosa, L. A. & Valdez-Mondragón, A*. 2021. Distribución y modelaje de nicho ecológico, comentarios biogeográficos y taxonómicos del género de arañas Latrodectus (Araneae: Theridiidae) de México. Revista Mexicana de Biodiversidad. 92: 1-20.
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- Schramm, F.*, Valdez-Mondragón, A. & L. Prendini. 2021. Volcanism and palaeoclimate change drive diversification of world's largest whip spider (Amblypygi). Molecular Ecology. 30 (8): 1-19.
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- Nolasco, S. & A. Valdez-Mondragón*. 2020. On the daddy long-legs spiders of the genus Physocyclus (Araneae: Pholcidae) from Mexico: description of a new species from the Baja California Peninsula. Revista Mexicana de Biodiversidad. 91: 1-7.
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- Navarro-Rodríguez, C. I. & A. Valdez-Mondragón*. 2020. Description of a new species of Loxosceles Heineken & Lowe (Araneae, Sicariidae) recluse spiders from Hidalgo, Mexico, under integrative taxonomy: morphological and DNA barcoding data (CO1 + ITS2). European Journal of Taxonomy. 704: 1-30.
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- García-Villafuente, M. A. & A. Valdez-Mondragón*. 2020. The oldest fossils of the spider subfamily Modisiminae from the Americas: Description of a new species of the genus Modisimus Simon (Araneae: Pholcidae) from the amber of Mexico with a checklist of the extant Mexican species. Journal of South American Earth Sciences. 103: 1-14.
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- Valdez-Mondragón, A.*, Cortez-Roldán, M. R. & E. F. Campuzano-Granados. 2020. On the Mexican ricinuleids: a new species of the genus Pseudocellus (Arachnida: Ricinulei: Ricinoididae) from the cloud forest of Chiapas, Mexico. Revista Mexicana de Biodiversidad. 91: 1-12.
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- Valdez-Mondragón, A.* 2020. COI mtDNA barcoding and morphology for species delimitation in the spider genus Ixchela Huber (Araneae: Pholcidae), with the description of two new species from Mexico. Zootaxa. 4747 (1): 54–76.
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- Valdez-Mondragón, A.*, Navarro-Rodríguez, C. I., Solís-Catalán, K. P., Cortez-Roldán, M. R. & A. R. Juárez-Sánchez. 2019. Under an integrative taxonomic approach: the description of a new species of the genus Loxosceles (Araneae, Sicariidae) from Mexico City. ZooKeys. 892: 93-133.
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- Valdez-Mondragón, A.*, Cortez-Roldán, M. R., Juárez-Sánchez, A. R. & K. P. Solís-Catalán. 2018. A new species of Loxosceles Heineken & Lowe (Araneae, Sicariidae), with updated distribution records and biogeographical comments for the species from Mexico, including a new record of Loxosceles rufescens (Dufour). ZooKeys. 802: 39-66.
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- Eberle, J.*, Dimitrov, D., Valdez-Mondragón, A. & B. A. Huber. 2018. Microhabitat change drives diversification in pholcid spiders. BMC Evolutionary Biology. 18: 141.
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- Valdez-Mondragón, A.*, Francke, O.F. & Botero-Trujillo, R. 2018. New morphological data for the order Ricinulei with the description of two new species of Pseudocellus (Arachnida: Ricinulei: Ricinoididae) from Mexico. The Journal of Arachnology. 46: 114–132.
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- Valdez-Mondragón, A.* 2014. A reanalysis of the morphological phylogeny of the spider genus Physocyclus Simon (Araneae: Pholcidae) with the description of a new species and description of the female of Physocyclus paredesi Valdez-Mondragón from Mexico. Zootaxa. 3866 (2): 202-220.
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- Valdez-Mondragón, A.*, J. I. Mendoza & O. F. Francke. 2014. First record of the mygalomorph spider family Paratropididae (Arachnida, Araneae) in North America with the description of a new species of Paratropis Simon from Mexico, and with new ultramorphological data for the family. ZooKeys. 416: 1-21.
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- Valdez-Mondragón, A.* 2013a. Taxonomic revision of the spider genus Ixchela Huber, 2000 (Araneae: Pholcidae), with description of ten new species from Mexico and Central America. Zootaxa. 3608 (5): 285-327.
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- Valdez-Mondragón, A.* 2013b. Morphological phylogenetic analysis of the spider genus Physocyclus (Araneae: Pholcidae). The Journal of Arachnology. 41: 184-196.
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- Valdez-Mondragón, A.* 2010b. Revisión taxonómica del género de arañas Physocyclus Simon, 1893 (Araneae: Pholcidae), con la descripción de especies nuevas de México. Revista Ibérica de Aracnología. 18: 3-80.
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